期刊信息

  • 刊名: 河北师范大学学报(自然科学版)Journal of Hebei Normal University (Natural Science)
  • 主办: 河北师范大学
  • ISSN: 1000-5854
  • CN: 13-1061/N
  • 中国科技核心期刊
  • 中国期刊方阵入选期刊
  • 中国高校优秀科技期刊
  • 华北优秀期刊
  • 河北省优秀科技期刊

锌指核酸酶技术最新进展及其在植物基因工程中的应用

  • 1. 河北师范大学 生命科学学院, 河北 石家庄 050024;
    2. 河北省承德医学院 生物学教研室, 河北 承德 067000;
    3. 石家庄市第四中学, 河北 石家庄 050011
  • DOI: 10.13763/j.cnki.jhebnu.nse.2015.03.013

The Latest Progress in Zinc Finger Nucleases and Their Applications in Plant Science

摘要/Abstract

摘要:

锌指核酸酶(zinc finger nucleases,ZFNs)是近年来发展起来的一项定点改变基因组序列的新技术.它能够特异切开基因组中的特定序列,产生双链断裂DNA,诱导细胞启动DNA损伤修复过程,在修复过程中实现对靶基因的敲除或改变.这一技术可以通过删除某一基因或一个基因的一部分、导入点突变等,对该基因的功能进行研究,也可以定向改变基因组序列,使生物体获得新的功能.这项技术在基因功能的研究和新药的研发、新品种选育等方面有着十分广阔的应用前景,是后基因组时代基因功能研究的重要手段.介绍了ZFNs工作原理,重点阐述了该技术近几年的最新进展及其在植物学领域的应用,同时也对ZFNs存在的问题进行了深入分析.

Abstract:

Zinc finger nucleases (ZFNs) is a recently developed technology for targeted genome modification.The enzyme can bind specially to,and hence cleave the target sequences,resulting in double-strand breaks (DSBs).Mutations were introduced into the genome during DSBs reparation.ZFNs were widely used to reveal functions of a gene by knock-out or modification of the gene,or to gain new functions of biological organisms.ZFNs are powerful tools in post-genomic era,and had a wide use in gene function study,new drug research and development,and breeding of new varieties.Besides a brief introduction of ZFNs,we mainly focus on the latest progress,and the applications in plant science.At the same time,we also analyzed some problems that need to be solved in the future.

参考文献 32

  • [1] WYMAN C,KANAAR R.DNA Double-strand Break Repair:All's Well That Ends Well[J].Annu Rev Genet,2006,40:363-383.
  • [2] QI Y,ZHANG Y,ZHANG F,et al.Increasing Frequencies of Site-specific Mutagenesis and Gene Targeting in Arabidopsis by Manipulating DNA Repair Pathways[J].Genome Res,2013,23(3):547-554.
  • [3] VAINSTEIN A,MARTON I,ZUKER A,et al.Permanent Genome Modifications in Plant Cells by Transient Viral Vectors[J].Trends Biotechnol,2011,29(8):363-369.
  • [4] ROTHSTEIN R.Targeting,Disruption,Replacement and Allele Rescue:Integrative DNA Transformation in Yeast[J].Methods Enzymol,1991,194:281-301.
  • [5] CAPECCHI M R.Altering the Genome by Homologous Recombination[J].Science,1989,244(4910):1288-1292.
  • [6] WRIGHT D A,TOWNSEND J A,WINFREY R J,et al.High-frequency Homologous Recombination in Plants Mediated by Zinc-finger Nucleases[J].Plant J,2005,44(4):693-705.
  • [7] LLOYD A,PLAISIER C L,CARROLL D,et al.Targeted Mutagenesis Using Zinc-finger Nucleases in Arabidopsis[J].Proc Natl Acad Sci USA,2005,102(6):2232-2237.
  • [8] URNOV F D,REBAR E J,HOLMES M C,et al.Genome Editing with Engineered Zinc Finger Nucleases[J].Nat Rev Genet,2010,11(9):636-646.
  • [9] MAEDER M L,THIBODEAU-BEGANNY S,SANDER J D,et al.Oligomerized Pool Engineering (OPEN):An 'open-source' Protocol for Making Customized Zinc-finger Arrays[J].Nat Protoc,2009,4(10):1471-1501.
  • [10] SANDER J D,ZABACK P,JOUNG J K,et al.Zinc Finger Targeter (ZiFiT):An Engineered Zinc Finger/target Site Design Tool[J].Nucleic Acids Res,2007,35:W599-605.
  • [11] TERADA R,JOHZUKA-HISATOMI Y,SAITOH M,et al.Gene Targeting by Homologous Recombination as a Biotechnological Tool for Rice Functional Genomics[J].Plant Physiol,2007,144(2):846-856.
  • [12] NASSIF N,PENNEY J,PAL S,et al.Efficient Copying of Nonhomologous Sequences from Ectopic Sites via P-element-induced Gap Repair[J].Mol Cell Biol,1994,14(3):1613-1625.
  • [13] GOLDBERG A D,BANASZYNSKI L A,NOH K M,et al.Distinct Factors Control Histone Variant H3.3 Localization at Specific Genomic Regions[J].Cell,2010,140(5):678-691.
  • [14] CAI C Q,DOYON Y,AINLEY W M,et al.Targeted Transgene Integration in Plant Cells Using Designed Zinc Finger Nucleases[J].Plant Mol Biol,2009,69(6):699-709.
  • [15] SHUKLA V K,DOYON Y,MILLER J C,et al.Precise Genome Modification in the Crop Species Zea Mays Using Zinc-finger Nucleases[J].Nature,2009,459(7245):437-441.
  • [16] ZHANG F,MAEDER M L,UNGER-WALLACE E,et al.High Frequency Targeted Mutagenesis in Arabidopsis Thaliana Using Zinc Finger Nucleases[J].Proc Natl Acad Sci USA,2010,107(26):12028-12033.
  • [17] BOZAS A,BEUMER K J,TRAUTMAN J K,et al.Genetic Analysis of Zinc-finger Nuclease-induced Gene Targeting in Drosophila[J].Genetics,2009,182(3):641-651.
  • [18] DOETSCHMAN T,GREGG R G,MAEDA N,et al.Targetted Correction of a Mutant HPRT Gene in Mouse Embryonic Stem Cells[J].Nature,1987,330(6148):576-578.
  • [19] THOMAS K R,CAPECCHI M R.Site-directed Mutagenesis by Gene Targeting in Mouse Embryo-derived Stem Cells[J].Cell,1987,51(3):503-512.
  • [20] PUCHTA H,DUJON B,HOHN B.Two Different But Related Mechanisms Are Used in Plants for the Repair of Genomic Double-strand Breaks by Homologous Recombination[J].Proc Natl Acad Sci USA,1996,93(10):5055-5060.
  • [21] XIAO Y L,PETERSON T.Intrachromosomal Homologous Recombination in Arabidopsis Induced by a Maize Transposon[J].Mol Gen Genet,2000,263(1):22-29.
  • [22] TOWNSEND J A,WRIGHT D A,WINFREY R J,et al.High-frequency Modification of Plant Genes Using Engineered Zinc-finger Nucleases[J].Nature,2009,459(7245):442-445.
  • [23] de PATER S,PINAS J E,HOOYKAAS P J,et al.ZFN-mediated Gene Targeting of the Arabidopsis Protoporphyrinogen Oxidase Gene Through Agrobacterium-mediated Floral Dip Transformation[J].Plant Biotechnol J,2013,11(4):510-515.
  • [24] 张伟锋,夏海滨.锌指核酸酶技术的应用[J].生命的化学,2011,31(1):146-151.
  • [25] 阚国仕,马小路,李珊珊,等.植物基因靶向整合技术研究进展[J].湖北农业科学,2011,50(17):3476-3479.
  • [26] OSAKABE K,OSAKABE Y,TOKI S.Site-directed Mutagenesis in Arabidopsis Using Custom-designed Zinc Finger Nucleases[J].Proc Natl Acad Sci USA,2010,107(26):12034-12039.
  • [27] SIZOVA I,GREINER A,AWASTHI M,et al.Nuclear Gene Targeting in Chlamydomonas Using Engineered Zinc-finger Nucleases[J].Plant J,2013,73(5):873-882.
  • [28] SYMINGTON L S,GAUTIER J.Double-strand Break End Resection and Repair Pathway Choice[J].Annu Rev Genet,2011,45:247-271.
  • [29] CHOU C,DEITERS A.Light-activated Gene Editing with a Photocaged Zinc-finger Nuclease[J].Angew Chem Int Ed Engl,2011,50(30):6839-6842.
  • [30] MILLER J C,HOLMES M C,WANG J,et al.An Improved Zinc-finger Nuclease Architecture for Highly Specific Genome Editing[J].Nat Biotechnol,2007,25(7):778-785.
  • [31] PRUETT-MILLER S M,READING D W,PORTER S N,et al.Attenuation of Zinc Finger Nuclease Toxicity by Small-molecule Regulation of Protein Levels[J].PLoS Genet,2009,5(2):e1000376.
  • [32] DOYLE J J,FLAGEL L E,PATERSON A H,et al.Evolutionary Genetics of Genome Merger and Doubling in Plants[J].Annu Rev Genet,2008,42:443-461.